BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021E10SP1|AL427780
(1009 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1488 1954 0.0
>3x_Contig1488
Length = 9807
Score = 1954 bits (975), Expect = 0.0
Identities = 992/1009 (98%)
Strand = Plus / Plus
Query: 1 gatcaggggctgttaatagctgagatttttccgaaaatatcagagagcagtaagacacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1998 gatcaggggctgttaatagctgagatttttccgaaaatatcagagagcagtaagacacct 2057
Query: 61 cgttctctaaactttgcattgaataatctaamacccattttatatgagctcattcgagct 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2058 cgttctctaaactttgcattgaataatctaaaacccattttatatgagctcattcgagct 2117
Query: 121 cacgagaggttttcatatagacacatcatcaataatatatgccccaaatcagatactttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2118 cacgagaggttttcatatagacacatcatcaataatatatgccccaaatcagatactttc 2177
Query: 181 tattcatcacccaaaagtgtcatcaaactgctcattgtatgtgttagamaaacgttccca 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2178 tattcatcacccaaaagtgtcatcaaactgctcattgtatgtgttagaaaaacgttccca 2237
Query: 241 ttggacctgttaggatcaaattcaaactatagcgttctatcaaaagcgattgcvatactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2238 ttggacctgttaggatcaaattcaaactatagcgttctatcaaaagcgattgcaatactt 2297
Query: 301 gtcaaaavaccgctccattcaaagatactatttgatgaattatgtraaggrttgcgtgtg 360
||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 2298 gtcaaaaaaccgctccattcaaagatactatttgatgaattatgtaaaggattgcgtgtg 2357
Query: 361 avagatgtcaaatggctagaaacaaggcggcttccagctggtgaacaaactcaaaagatt 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2358 aaagatgtcaaatggctagaaacaaggcggcttccagctggtgaacaaactcaaaagatt 2417
Query: 421 ccatattatgatgtgaaavatcgacaagcgcttctttataaactgtttttttggrtcctt 480
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2418 ccatattatgatgtgaaaaatcgacaagcgcttctttataaactgtttttttggatcctt 2477
Query: 481 tcctgttacgtcccaaaattactatctacmtttttctatgtgacagavctatcgtcgact 540
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 2478 tcctgttacgtcccaaaattactatctacatttttctatgtgacagaactatcgtcgact 2537
Query: 541 gtcgatatagtttatvttcgtcatgatacttggraaaccatgtcacaaccttttttgava 600
||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 2538 gtcgatatagtttatattcgtcatgatacttggaaaaccatgtcacaaccttttttgaaa 2597
Query: 601 tcttactttaggaggtatttgcttgagaatmaatattgtktccagcacagatctttcaca 660
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 2598 tcttactttaggaggtatttgcttgagaataaatattgtttccagcacagatctttcaca 2657
Query: 661 gaatccaagttcaatcacagaaatcttcgtttaataccaaaaaaatcaggcctcgatttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2658 gaatccaagttcaatcacagaaatcttcgtttaataccaaaaaaatcaggcctcgatttc 2717
Query: 721 agaataatagcggtgccgtgtaaaggagtcaatatacaagagtttaacgagtttaatgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2718 agaataatagcggtgccgtgtaaaggagtcaatatacaagagtttaacgagtttaatgat 2777
Query: 781 tacgttacgaacgctctgaagcccaccaagattatactggaaagattgaggatgagacga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2778 tacgttacgaacgctctgaagcccaccaagattatactggaaagattgaggatgagacga 2837
Query: 841 aataccaagtttacaaaagcattctctcctttggaaatacccaagattgtattaagttat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2838 aataccaagtttacaaaagcattctctcctttggaaatacccaagattgtattaagttat 2897
Query: 901 aagcaaaggctacttttaaaacatggtaaaataccgaatctctatcttttaaagtttgac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2898 aagcaaaggctacttttaaaacatggtaaaataccgaatctctatcttttaaagtttgac 2957
Query: 961 attcaatcctgctatgattcaattccggttcagaaagtwatgaaattgg 1009
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2958 attcaatcctgctatgattcaattccggttcagaaagtaatgaaattgg 3006
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6491
Number of Sequences: 1807
Number of extensions: 6491
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 1009
length of database: 10,358,551
effective HSP length: 16
effective length of query: 993
effective length of database: 10,329,639
effective search space: 10257331527
effective search space used: 10257331527
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)